October 2018
Mon. 1 Oct, 2018
UPSC Monday Seminar 2018
Mon. 1 Oct, 2018 9:00 - 10:00
UPSC Monday Seminarseries 2018
9:00 Bernadette Sztojka
Department of Plant Physiology
Title: Novel regulators of lignification
Supervisor: Hannele Tuominen
9:30 Ioanna Antoniadi
Department of Forest Genetics and Plant Physiology
Title: FACSology in theory and practice
Supervisor: Karin Ljung
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
9:00 Bernadette Sztojka
Department of Plant Physiology
Title: Novel regulators of lignification
Supervisor: Hannele Tuominen
9:30 Ioanna Antoniadi
Department of Forest Genetics and Plant Physiology
Title: FACSology in theory and practice
Supervisor: Karin Ljung
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
Fri. 5 Oct, 2018
PhD Thesis Defence: Bernard Wessels
Fri. 5 Oct, 2018 9:00 - 13:00
Thesis defence
Bernard Wessels
Department of Plant Physiology
Title: The significance of ethylene and ETHYLENE RESPONSE FACTORS in wood formation of hybrid aspen
Faculty opponent: Kurt Fagerstedt, Professor, Faculty of Biological and Environmental Sciences, University of Helsinki
Supervisor: Hannele Tuominen
Bernard Wessels
Department of Plant Physiology
Title: The significance of ethylene and ETHYLENE RESPONSE FACTORS in wood formation of hybrid aspen
Faculty opponent: Kurt Fagerstedt, Professor, Faculty of Biological and Environmental Sciences, University of Helsinki
Supervisor: Hannele Tuominen
Mon. 8 Oct, 2018
UPSC Monday Seminar 2018
Mon. 8 Oct, 2018 9:00 - 10:00
UPSC Monday Seminarseries 2018
9:00 Kristoffer Jonsson
Department of Forest Genetics and Plant Physiology
Title: Mechanical control of differential elongation during apical hook development in Arabidopsis
Supervisor: Rishikesh Bhalerao
9:30 John Baison
Department of Forest Genetics and Plant Physiology
Title: Initial steps in discerning the genetics underlying complex traits in Norway Spruce
Supervisor: Harry Xiaming Wu
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
9:00 Kristoffer Jonsson
Department of Forest Genetics and Plant Physiology
Title: Mechanical control of differential elongation during apical hook development in Arabidopsis
Supervisor: Rishikesh Bhalerao
9:30 John Baison
Department of Forest Genetics and Plant Physiology
Title: Initial steps in discerning the genetics underlying complex traits in Norway Spruce
Supervisor: Harry Xiaming Wu
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
DIMPA - COST Training School
All day
DIMPA - Detection and Identification of Microorgansims in Plants and Arthropods
COST Training School 8-10 October 2018, UmeåCOST FA1405 "Using three-way interactions between plants, microbes and arthropods to enhance crop protection and production
Open lectures in Stora Fokusrummet KB.F3.01
Time |
Monday October 8th |
9:00-10:00 | Welcome. Biological materials. Fungal endophytes |
Benedicte Albrectsen, Umeå University | |
10:00-11:00 | Isolation of mycorrhizal fungi and inocculation of plants |
Judith Felten, Swedish University of Agricultural Sciences | |
11:00-12:00 | Stainings for fungi, plants and tannins |
Judith Felten, Swedish University of Agricultural Sciences | |
13:00-14:00 | Fluorescent In Situ Hybridization (FISH) for Identification of Microorganisms |
Natuschka Lee, Umeå University | |
14:00-15:00 | Genes and Genomes of microorganisms |
Natuschka Lee, Umeå University | |
15:00-16:00 | Meta-genomics and -transcriptomics |
Nathaniel Street, Umeå University | |
Time |
Wednesday October 10th |
09:00-09:45 | Microdialysis for microscale root-microbe interactions |
Sandra Jämtgård, Swedish University of Agricultural Sciences | |
10:15-11:00 | Sequencing techniques to study fungi in forest soils |
Björn Lindahl, Swedish University of Agricultural Sciences | |
11:00-11:45 | Some insights into soil fauna (soil organism-plant interactions) |
Astrid Taylor, Swedish University of Agricultural Sciences | |
13:00-13:45 | Detection of microorganismer in roots - signatur analyses of fatty acids |
Sabine Ravnskov, Aarhus University | |
14:30-15:15 | Amplicon sequencing of 16S rRNA for analysis of the plant microbiome |
Juraj Medo, Slovak University of Agriculture in Nitra |
Wed. 10 Oct, 2018
DIMPA - COST Training School
All day
DIMPA - Detection and Identification of Microorgansims in Plants and Arthropods
COST Training School 8-10 October 2018, UmeåCOST FA1405 "Using three-way interactions between plants, microbes and arthropods to enhance crop protection and production
Open lectures in Stora Fokusrummet KB.F3.01
Time |
Monday October 8th |
9:00-10:00 | Welcome. Biological materials. Fungal endophytes |
Benedicte Albrectsen, Umeå University | |
10:00-11:00 | Isolation of mycorrhizal fungi and inocculation of plants |
Judith Felten, Swedish University of Agricultural Sciences | |
11:00-12:00 | Stainings for fungi, plants and tannins |
Judith Felten, Swedish University of Agricultural Sciences | |
13:00-14:00 | Fluorescent In Situ Hybridization (FISH) for Identification of Microorganisms |
Natuschka Lee, Umeå University | |
14:00-15:00 | Genes and Genomes of microorganisms |
Natuschka Lee, Umeå University | |
15:00-16:00 | Meta-genomics and -transcriptomics |
Nathaniel Street, Umeå University | |
Time |
Wednesday October 10th |
09:00-09:45 | Microdialysis for microscale root-microbe interactions |
Sandra Jämtgård, Swedish University of Agricultural Sciences | |
10:15-11:00 | Sequencing techniques to study fungi in forest soils |
Björn Lindahl, Swedish University of Agricultural Sciences | |
11:00-11:45 | Some insights into soil fauna (soil organism-plant interactions) |
Astrid Taylor, Swedish University of Agricultural Sciences | |
13:00-13:45 | Detection of microorganismer in roots - signatur analyses of fatty acids |
Sabine Ravnskov, Aarhus University | |
14:30-15:15 | Amplicon sequencing of 16S rRNA for analysis of the plant microbiome |
Juraj Medo, Slovak University of Agriculture in Nitra |
The new confocals at UPSC and the theory behind (part 1)
Wed. 10 Oct, 2018 10:00 - 12:00
This session will include presentations on
Lectures are given by Eric Muren and Hans Thorn from Carl Zeiss AB
- Airyscan – the new part for both confocals
- Optimization of image acquisition
- ZEN blue image analysis – the software for Zeiss LSM 800
- Interactive measurements
- Panorama/ tiles and position – the new software to do overview imaging and then use it for detailed imaging
Lectures are given by Eric Muren and Hans Thorn from Carl Zeiss AB
Thu. 11 Oct, 2018
Cell Wall Minisymposium
Thu. 11 Oct, 2018 13:15 - 15:30
Cell wall Minisymposium
Candidates for the cell wall group leader position at UPSC present their research
13:15 Stephane Verger
University of Lyon, Lyon, France
Title: Mechanics and dynamics of cell to cell adhesion in plants
14:00 Berit Ebert
University of Melbourne, Melbourne, Australia
Title: From nucleotide sugars to polysaccharides: Providing the building blocks for glycan biosynthesis
14:45 Colin Ruprecht
Max Planck Institute, Potsdam-Golm, Germany
Title: Synthesis and visualization of plant cell wall polysaccharides
Contact: Totte Niittylä
Candidates for the cell wall group leader position at UPSC present their research
13:15 Stephane Verger
University of Lyon, Lyon, France
Title: Mechanics and dynamics of cell to cell adhesion in plants
14:00 Berit Ebert
University of Melbourne, Melbourne, Australia
Title: From nucleotide sugars to polysaccharides: Providing the building blocks for glycan biosynthesis
14:45 Colin Ruprecht
Max Planck Institute, Potsdam-Golm, Germany
Title: Synthesis and visualization of plant cell wall polysaccharides
Contact: Totte Niittylä
Mon. 15 Oct, 2018
UPSC Monday Seminar 2018
Mon. 15 Oct, 2018 9:00 - 10:00
UPSC Monday Seminarseries 2018
9:00 Thi Hai Hong Nguyen
Department of Forest Genetics and Plant Physiology
Title: Genetic improvement potential for leaf essential oil production in Melaleuca cajuputi
Supervisor: Harry Xiaming Wu
9:30 Silvio Collani
Department of Plant Physiology
Title: Atypical DNA-binding site could reveal new FD interactors in Arabidopsis thaliana
Supervisor: Markus Schmid
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
9:00 Thi Hai Hong Nguyen
Department of Forest Genetics and Plant Physiology
Title: Genetic improvement potential for leaf essential oil production in Melaleuca cajuputi
Supervisor: Harry Xiaming Wu
9:30 Silvio Collani
Department of Plant Physiology
Title: Atypical DNA-binding site could reveal new FD interactors in Arabidopsis thaliana
Supervisor: Markus Schmid
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
Tue. 16 Oct, 2018
UPSC Cutting-Edge Seminar: Raphaël Mercier
Tue. 16 Oct, 2018 10:15 - 11:15
UPSC Cutting-Edge Seminar
Raphaël Mercier
Institut Jean-Pierre Bourgin, INRA Versailles, France
Title: What limits meiotic recombination?
Host: Catherine Bellini
Abstract:
Raphaël Mercier
Institut Jean-Pierre Bourgin, INRA Versailles, France
Title: What limits meiotic recombination?
Host: Catherine Bellini
Abstract:
Meiosis is an essential stage in the life cycle of sexually-reproducing organisms. Indeed, meiosis is the specialized cell division that reduces the number of chromosomes from two sets in the parent to one set in gametes, while fertilization restores the original chromosome number. Meiosis is also the stage of development when genetic recombination occurs, thus being the heart of Mendelian heredity. Increasing our knowledge on meiotic mechanisms, in addition to its intrinsic interest, would have also important implications for agriculture and medicine.
Arabidopsis emerged as one of the prominent models in the field of meiosis. Indeed, the meiotic field benefits greatly from a multi-model approach with several kingdoms represented, highlighting both conserved mechanisms and variation around the theme. Arabidopsis emerged as a very good model to study meiosis, notably because of the possibility of large scale genetic studies and the wide range of molecular and cytological tools. Raphaël Mercier and his team aim at deciphering meiotic mechanisms, including recombination, cell cycle and sister chromatid cohesion modifications, and their functional relationships. To achieve this goal, they are conducting various genetic screens and characterizing the key players that they identified.
Apomixis results in progeny that are genetic clones of the maternal parent and thus is of great interest due to its potential revolutionary application in crop improvement. By introducing apomixis into sexual plants, any desired genotype, no matter how complex, could be perpetuated through successive seed generations. However, despite the occurrence of apomixis in over 400 species of angiosperms, very few crop species are apomictic and attempts to introduce this trait by crossing have failed. Raphaël Mercier ‘s projects aim, via a better understanding of sexual reproduction processes, to de novo engineer apomixes in sexual plants
Mon. 22 Oct, 2018
UPSC Monday Seminar 2018
Mon. 22 Oct, 2018 9:00 - 10:00
UPSC Monday Seminarseries 2018
9:00 Ainhoa Calleja-Rodriguez
Department of Forest Genetics and Plant Physiology
Title: Genotype-by-environment interactions between tree vitality and height in Scots pine
Supervisor: Harry Xiaming Wu
9:30 Jonathan Przybyla-Toscano
Department of Plant Physiology
Title: Fe-S cluster biogenesis and Fe-S protein maturation in Arabidopsis mitochondria
Supervisor: Olivier Keech
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
9:00 Ainhoa Calleja-Rodriguez
Department of Forest Genetics and Plant Physiology
Title: Genotype-by-environment interactions between tree vitality and height in Scots pine
Supervisor: Harry Xiaming Wu
9:30 Jonathan Przybyla-Toscano
Department of Plant Physiology
Title: Fe-S cluster biogenesis and Fe-S protein maturation in Arabidopsis mitochondria
Supervisor: Olivier Keech
Place: Lilla hörsalen
Time: 9:00-10:00
Contact: Anne Honsel
Mon. 29 Oct, 2018
UPSC Monday Seminar 2018
Mon. 29 Oct, 2018 9:00 - 10:00
UPSC Monday Seminarseries 2018
9:00 Evgeniy Donev
Department of Forest Genetics and Plant Physiology
Title: Glucuronoyl Esterase - a new promise for the enzyme use in transgenics
Supervisor: Ewa Mellerowicz
9:30 Sara Raggi
Department of Forest Genetics and Plant Physiology
Title: Investigating the role of the cuticle during apical hook development
Supervisor: Stéphanie Robert
Place: Carl Kempe salen
Time: 9:00-10:00
Contact: Anne Honsel
9:00 Evgeniy Donev
Department of Forest Genetics and Plant Physiology
Title: Glucuronoyl Esterase - a new promise for the enzyme use in transgenics
Supervisor: Ewa Mellerowicz
9:30 Sara Raggi
Department of Forest Genetics and Plant Physiology
Title: Investigating the role of the cuticle during apical hook development
Supervisor: Stéphanie Robert
Place: Carl Kempe salen
Time: 9:00-10:00
Contact: Anne Honsel
Tue. 30 Oct, 2018
UPSC Seminar: Uriel Urquiza-García
Tue. 30 Oct, 2018 10:00 - 11:00
UPSC Seminar
Uriel Urquiza-García
School of Biological Sciences, The University of Edinburgh, United Kingdom
Title: Absolute quantification of clock proteins reveals a quantitative engineering path for tuning the Arabidopsis circadian oscillator and output pathways
Host: Maria Eriksson
More information:
20181030_UrielUrquiza-Garcia_abstract.pdf
Uriel Urquiza-García
School of Biological Sciences, The University of Edinburgh, United Kingdom
Title: Absolute quantification of clock proteins reveals a quantitative engineering path for tuning the Arabidopsis circadian oscillator and output pathways
Host: Maria Eriksson
More information:
20181030_UrielUrquiza-Garcia_abstract.pdf